2026 Feb. - Glad to share that the manuscript with the title “ An Fc receptor and IgA functional signature identified TB diseases in children living with HIV” is now available in medRxiv.

2026 Jan. - Chuangqi gave a talk on the Peak to Peak Physics Club meeting in the high school with the title “ Systems Immunology in the age of AI”.

2026 Jan. - Glad to announce that as the co-author, the paper titled “BCG vaccination induces antibacterial effector functions among Vδ1/3 T cells that are associated with protection against tuberculosis” was published in Cell Reports Medicine and online now.

2026 Jan. - Ziwei and Chuangqi attend the Keystone Symposium on “From Systems Immunology to Immunoengineering”, Vancouver, Canada.

• Ziwei gave a short talk and poster presentation on “Continuous-time Sparse Time Series Chain Graphical Model Dissects Temporal Immune Dynamics in IV-BCG Vaccinated NHPs against Tuberculosis”.

• Chuangqi was invited to join the panel discussion on the topic “Immunology in the age of AI”.

2025 Nov. - With our collaborator Dr. Bonnie Gunn, Chuangqi gave a talk about EBV effects in RA disease progression in the Center for Mucosal Immunology and Rheumatic Disease Pathogenesis Symposium (CMIR).

2025 Oct. - Chuangqi gave a lighting talk and Poster Presentation on Translational HIV Vaccine ESI Conference (HVTN) and NHP AIDS Symposium, Madson, WI.

2025 Oct. - Welcome Yifan to join the team! She will join the TB project for developing the computational models to unravel the Vitamin A effects in TB disease progression.

2025 Sep. - Chuangqi gave a lab/projects introduction in Infectious Disease Division Collaboration Meeting.

2025 July - Chuangqi received the travel award to attend 2025 HVTN Translational HIV/TB Vaccine Early-Stage Investigator (ESI) Conference and NHP AIDS Symposium from Sep. 28th to Oc. 3rd.

2025 Feb - Attending the Keystone TB Symposium 2025 in Boston: Chuangqi gave a talk about the signature definition of TB progressor; Jo and Nannan presented our posters there.

2025 Feb - Welcome Shuozhi to join the lab as the Research Assistant for 6 months. He will lead the multi-omics integration to investigate the TB progression.

2024 December- Chuangqi gave a short talk titled “Temporal Immune Correlates of Protection in IV-BCG dose study” in 2024 IMPAc-TB annual meeting last week in NIH.

2024 December- Glad to announce that as the co-author, the paper titled “Humoral correlates of protection against Mycobacterium tuberculosis following intravenous BCG vaccination in rhesus macaques” was published in iScience.

2024 December- Congratulations on Nannan receiving a Keystone Symposia Future of Science Fund Scholarship to support her attendance at Tuberculosis: Heterogeneity from Experimental Models to Human Disease next Feb. in Boston, MA.

2024 November- Glad to share that Jo and Nannan’s abstracts were both accepted by TB keystone Somposia 2025, held in Boston next Feb.

2024 November- Glad to announce that as the co-author, the paper titled “Markov field network model of multi-modal data predicts effects of immune system perturbations on intravenous BCG vaccination in macaques” was published in Cell Systems.

2024 September- Our paper “Interpretable Fine-Grained Phenotypes of Subcellular Dynamics via Unsupervised Deep Learning” is finally online here. Feel free to reach out if any parts are interested!

204 September- The new class “Omic Data Analysis” has been launched this fall, specifically designed for students with limited computational backgrounds. This course mainly focuses on multivariate data analysis and applied Machine Learning techniques.

2024 August- Welcome Ziwei Tian from Biostatistics and Bioinformatics Program, to join the lab as the Research Assistant.

2024 August- Glad to announce that our manuscript“Interpretable Fine-Grained Phenotypes of Subcellular Dynamics via Unsupervised Deep Learning” was accepted in Advanced Science. Online version will come soon!

2024 June - Glad to announce that as the co-author, the paper titled “Deep Learning-Based Automated Analysis of NK Cell Cytotoxicity in Single Cancer Cell Arrays” was published in BioChip Journal.

2024 June - Chuangqi was invited to join the CTVD meeting at Gates Foundation as an Early Career Researcher and gave a short talk titled as “Immune Correlates of Protection in IV-BCG dose study: pre-existing and BCG-activated immune responses”. Always glad to meet our collaborators in person and discuss the research progress with other PIs.

2024 May - Chuangqi gave a short seminar introducing the “Systems Immunology” career path titled “When Biology/Medicine Meet the Computer Science” at the 2nd annual Career Day in the Aurora Science & Tech High School, DSST.

2024 May - I am glad to share that our proposal “Machine Learning Assisted HTP Tissue Array” by CO CVD Team (Dr. Wei Tan from CU Boulder and our Lab) was awarded by the Complement-Animal Research in Experimentation (Complement-ARIE) Challenge Competition, NIH.

2024 Arp -Our TB progressor paper is out in Nature Microbiology. We are also invited to write a blog published in Behind the paper channel, SPEINGER Nature Research Communities.

2024 Mar - Chuangqi attended the Keystone TB: Host-Pathogen Interface symposium last week and gave a poster presentation about the longitudinal analysis of immune propagation activated by the ivBCG vaccine across blood-lung compartments in NHPs.

2024 Mar - Chuangqi gave a talk in the Seminar of Our Department, titled “Systems Immunology: Unraveling the Immune Response to Infection”.

2024 Mar - Glad to share that Chuangqi gets a new affiliation, as a secondary faculty member, in the Department of Biomedical Informatics, starting on Mar. 15th.

2024 Feb - We received a Pilot Grant award from the Center for Mucosal Immunology and Rheumatic Disease Pathogenesis (CMIR), School of Medicine. This pilot grant will focus on investigating the EBV effects on RA progression by deeply profiling the humoral immune response of EBV and RA autoantibodies using a systems serology platform.

2024 Jan - Our manuscript of DeepHACKs in live cell imaging with the title “Uncovering Interpretable Fine-Grained Phenotypes of Subcellular Dynamics through Unsupervised Self-Training of Deep Neural Networks” was uploaded in bioRxiv.

2024 Jan - Exciting News: Our TB progressor paper “Age and sex modification of antibody profiles associated with tuberculosis progression” was accepted by Nature Microbiology. Keep posted!

2023 Nov - Chuangqi attended the IMPAcTB annual meeting in NIH and gave a talk “Human Demographic and Biologic Axes Modulate Immune Responses to Mtb and their Association with Protection” with Katy Bowman from Sarah Fortune Lab.

2023 Sep - We got additional funding from the IMPAcTB project (Accelerating Analysis Section).

2023 Sep - Chuangqi joined the 22nd Annual Colorado Immunology & Microbiology Conference at Steamboat Springs, CU.

2023 Sep - Happy to co-mentor Josephina Hendrix (Post-Doc in the Walter Lab) with Dr. Nicholas Walter on the host-pathogen Interaction project.

2023 Aug - Welcome Nannan Wang to join the lab as the Research Assistant. She is the 2nd Ph. D student in the Biostatistic Program.

2023 July - Chuangqi gave a talk at the Institute of Microbiology, Chinese Academy of Sciences, China.

2023 July - Chuangqi gave a talk at Peking University Peoples Hospital, China.

2023 June - (co-I) We received an NIAID R01 grant through collaboration with Dr. Brenden Podell at CSU.

2023 June - Welcome Jayden Wang to join the lab as the summer intern.

2023 May - Our paper “Airway T cells are a correlate of IV Baccille Calmette-Guerin mediated protection against tuberculosis in Rhesus Macaques” was published in Cell Host & Microbe. Congratulations on our collaborative team!!

2023 Apr - Our paper “Deep cross-modal feature learning applied to predicted acutely decompensated heart failure using in-home collected electrocardiography and transthoracic bioimpedance” was published in Artificial Intelligence in Medicine. Excited!!!

2023 Apr - Welcome Revanth Krishna to join the lab as the Software Engineering/Bioinformatician! Revanth is co-supervised with Dr. Fan Zhang.

2023 Jan- We got the subcontract funding from the IMPAcTB project.

2022 Sep - Wang Lab launched in RC1 North, CU Anschutz Medical Campus.